Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs62019885 | chr15:40886015 | C/T | 0.000159 | 205 | 14.17 | 19.5 | 16.63 | KM Plot |
KIRP | rs62025053 | chr16:19850726 | A/T | 2.95E-5 | 212 | 14.47 | 18.12 | 15.58 | KM Plot |
KIRP | rs62203401 | chr20:37226509 | A/G | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs62222192 | chr21:30240033 | G/A | 0.000397 | 213 | 17 | 14.95 | 1.03 | KM Plot |
KIRP | rs62222193 | chr21:30242437 | T/G | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222194 | chr21:30242487 | A/C | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222195 | chr21:30242820 | C/G | 0.000397 | 213 | 17 | 14.95 | 1.03 | KM Plot |
KIRP | rs62222196 | chr21:30242902 | C/T | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222197 | chr21:30242933 | T/G | 0.000675 | 210 | 17.03 | 15.07 | 1.03 | KM Plot |
KIRP | rs62222198 | chr21:30242986 | G/A | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222199 | chr21:30243289 | T/G | 0.000397 | 213 | 17 | 14.95 | 1.03 | KM Plot |
KIRP | rs62222200 | chr21:30244282 | T/C | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222201 | chr21:30244311 | T/G | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222202 | chr21:30244498 | G/A | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
KIRP | rs62222203 | chr21:30244508 | T/C | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |